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Category Order could not understand your category HTML. Please do the following:

Disable all plugins except for category order to see if some other plugin is causing the problem. If the problem goes away, re-enable each plugin until you find the incompatible one.
Try switching to a different theme, like the WordPress default theme.

Once you have tried the above steps, email david@coppit.org with the results of these debugging steps. Also include the following information:

Original HTML:
<li class="cat-item cat-item-1"><a href="https://blogs.bootsnall.com/seagulspecial/category/1" >1</a> (81)
</li>
<li class="cat-item cat-item-133603"><a href="https://blogs.bootsnall.com/seagulspecial/category/china-2015" >China 2015</a> (1)
</li>
<li class="cat-item cat-item-132"><a href="https://blogs.bootsnall.com/seagulspecial/category/travel" >Travel</a> (63)
</li>
<li class="cat-item cat-item-133602"><a href="https://blogs.bootsnall.com/seagulspecial/category/vietnam-2013" >Vietnam 2013</a> (2)
</li>

Processed HTML:
<li class="cat-item cat-item-1"><a href="https://blogs.bootsnall.com/seagulspecial/category/1" >1</a> (81)
</li>
<li class="cat-item cat-item-133603"><a href="https://blogs.bootsnall.com/seagulspecial/category/china-2015" >China 2015</a> (1)
</li>
<li class="cat-item cat-item-132"><a href="https://blogs.bootsnall.com/seagulspecial/category/travel" >Travel</a> (63)
</li>
<li class="cat-item cat-item-133602"><a href="https://blogs.bootsnall.com/seagulspecial/category/vietnam-2013" >Vietnam 2013</a> (2)
</li>

Category pattern:
/http\:\/\/blogs\.bootsnall\.com\/seagulspecial.*?\/category\/(?:[^\/"]+\/)*([^\/"]+)/

Items:
Array
(
    [0] => <li class="cat-item cat-item-1"><a href="https://blogs.bootsnall.com/seagulspecial/category/1" >1</a> (81) </li>
    [1] => <li class="cat-item cat-item-133603"><a href="https://blogs.bootsnall.com/seagulspecial/category/china-2015" >China 2015</a> (1) </li>
    [2] => <li class="cat-item cat-item-132"><a href="https://blogs.bootsnall.com/seagulspecial/category/travel" >Travel</a> (63) </li>
    [3] => <li class="cat-item cat-item-133602"><a href="https://blogs.bootsnall.com/seagulspecial/category/vietnam-2013" >Vietnam 2013</a> (2) </li>
)

1 (81)

China 2015 (1)

Travel (63)

Vietnam 2013 (2)