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Category Order could not understand your category HTML. Please do the following:

Disable all plugins except for category order to see if some other plugin is causing the problem. If the problem goes away, re-enable each plugin until you find the incompatible one.
Try switching to a different theme, like the WordPress default theme.

Once you have tried the above steps, email david@coppit.org with the results of these debugging steps. Also include the following information:

Original HTML:
<li class="cat-item cat-item-10980"><a href="https://blogs.bootsnall.com/theisen/category/around-the-pacific" >around the pacific</a> (16)
</li>
<li class="cat-item cat-item-10983"><a href="https://blogs.bootsnall.com/theisen/category/back-in-the-usa" >Back in the USA</a> (41)
</li>
<li class="cat-item cat-item-10979"><a href="https://blogs.bootsnall.com/theisen/category/before-the-trip" >Before the Trip</a> (1)
</li>
<li class="cat-item cat-item-19230"><a href="https://blogs.bootsnall.com/theisen/category/hiking-blog" >Hiking Blog</a> (5)
</li>
<li class="cat-item cat-item-10986"><a href="https://blogs.bootsnall.com/theisen/category/into-africa" >Into Africa</a> (9)
</li>
<li class="cat-item cat-item-963"><a href="https://blogs.bootsnall.com/theisen/category/japan" >japan</a> (9)
</li>
<li class="cat-item cat-item-2483"><a href="https://blogs.bootsnall.com/theisen/category/kl" >KL</a> (24)
</li>
<li class="cat-item cat-item-822"><a href="https://blogs.bootsnall.com/theisen/category/misc" >Misc</a> (5)
</li>
<li class="cat-item cat-item-10984"><a href="https://blogs.bootsnall.com/theisen/category/north-to-alaska" >North, to Alaska</a> (43)
</li>
<li class="cat-item cat-item-10982"><a href="https://blogs.bootsnall.com/theisen/category/sabah-malaysian-borneo" >Sabah, Malaysian Borneo</a> (3)
</li>
<li class="cat-item cat-item-10981"><a href="https://blogs.bootsnall.com/theisen/category/summer-in-the-states" >Summer in the States</a> (24)
</li>
<li class="cat-item cat-item-132"><a href="https://blogs.bootsnall.com/theisen/category/travel" >Travel</a> (14)
</li>

Processed HTML:
<li class="cat-item cat-item-10980"><a href="https://blogs.bootsnall.com/theisen/category/around-the-pacific" >around the pacific</a> (16)
</li>
<li class="cat-item cat-item-10983"><a href="https://blogs.bootsnall.com/theisen/category/back-in-the-usa" >Back in the USA</a> (41)
</li>
<li class="cat-item cat-item-10979"><a href="https://blogs.bootsnall.com/theisen/category/before-the-trip" >Before the Trip</a> (1)
</li>
<li class="cat-item cat-item-19230"><a href="https://blogs.bootsnall.com/theisen/category/hiking-blog" >Hiking Blog</a> (5)
</li>
<li class="cat-item cat-item-10986"><a href="https://blogs.bootsnall.com/theisen/category/into-africa" >Into Africa</a> (9)
</li>
<li class="cat-item cat-item-963"><a href="https://blogs.bootsnall.com/theisen/category/japan" >japan</a> (9)
</li>
<li class="cat-item cat-item-2483"><a href="https://blogs.bootsnall.com/theisen/category/kl" >KL</a> (24)
</li>
<li class="cat-item cat-item-822"><a href="https://blogs.bootsnall.com/theisen/category/misc" >Misc</a> (5)
</li>
<li class="cat-item cat-item-10984"><a href="https://blogs.bootsnall.com/theisen/category/north-to-alaska" >North, to Alaska</a> (43)
</li>
<li class="cat-item cat-item-10982"><a href="https://blogs.bootsnall.com/theisen/category/sabah-malaysian-borneo" >Sabah, Malaysian Borneo</a> (3)
</li>
<li class="cat-item cat-item-10981"><a href="https://blogs.bootsnall.com/theisen/category/summer-in-the-states" >Summer in the States</a> (24)
</li>
<li class="cat-item cat-item-132"><a href="https://blogs.bootsnall.com/theisen/category/travel" >Travel</a> (14)
</li>

Category pattern:
/http\:\/\/blogs\.bootsnall\.com\/theisen.*?\/category\/(?:[^\/"]+\/)*([^\/"]+)/

Items:
Array
(
    [0] => <li class="cat-item cat-item-10980"><a href="https://blogs.bootsnall.com/theisen/category/around-the-pacific" >around the pacific</a> (16) </li>
    [1] => <li class="cat-item cat-item-10983"><a href="https://blogs.bootsnall.com/theisen/category/back-in-the-usa" >Back in the USA</a> (41) </li>
    [2] => <li class="cat-item cat-item-10979"><a href="https://blogs.bootsnall.com/theisen/category/before-the-trip" >Before the Trip</a> (1) </li>
    [3] => <li class="cat-item cat-item-19230"><a href="https://blogs.bootsnall.com/theisen/category/hiking-blog" >Hiking Blog</a> (5) </li>
    [4] => <li class="cat-item cat-item-10986"><a href="https://blogs.bootsnall.com/theisen/category/into-africa" >Into Africa</a> (9) </li>
    [5] => <li class="cat-item cat-item-963"><a href="https://blogs.bootsnall.com/theisen/category/japan" >japan</a> (9) </li>
    [6] => <li class="cat-item cat-item-2483"><a href="https://blogs.bootsnall.com/theisen/category/kl" >KL</a> (24) </li>
    [7] => <li class="cat-item cat-item-822"><a href="https://blogs.bootsnall.com/theisen/category/misc" >Misc</a> (5) </li>
    [8] => <li class="cat-item cat-item-10984"><a href="https://blogs.bootsnall.com/theisen/category/north-to-alaska" >North, to Alaska</a> (43) </li>
    [9] => <li class="cat-item cat-item-10982"><a href="https://blogs.bootsnall.com/theisen/category/sabah-malaysian-borneo" >Sabah, Malaysian Borneo</a> (3) </li>
    [10] => <li class="cat-item cat-item-10981"><a href="https://blogs.bootsnall.com/theisen/category/summer-in-the-states" >Summer in the States</a> (24) </li>
    [11] => <li class="cat-item cat-item-132"><a href="https://blogs.bootsnall.com/theisen/category/travel" >Travel</a> (14) </li>
)