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Category Order could not understand your category HTML. Please do the following:

Disable all plugins except for category order to see if some other plugin is causing the problem. If the problem goes away, re-enable each plugin until you find the incompatible one.
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Once you have tried the above steps, email david@coppit.org with the results of these debugging steps. Also include the following information:

Original HTML:
<li class="cat-item cat-item-8192"><a href="https://blogs.bootsnall.com/kelly/category/deep-thoughts" title="Reflection on traveling, books I read, reviews on what I've seen, self-discovery and all sorts of really profound things that come up while seeing the world. (This is tongue-in cheek)">'Deep Thoughts'</a> (7)
</li>
<li class="cat-item cat-item-1231"><a href="https://blogs.bootsnall.com/kelly/category/australia" >Australia</a> (25)
</li>
<li class="cat-item cat-item-2297"><a href="https://blogs.bootsnall.com/kelly/category/cook-islands" >Cook Islands</a> (7)
</li>
<li class="cat-item cat-item-10700"><a href="https://blogs.bootsnall.com/kelly/category/egypt-2007" title="Our trip to Egypt; Petra, Jordan; and Jerusalem, Israel in late 2007.">Egypt, Petra, Jerusalem 2007</a> (21)
</li>
<li class="cat-item cat-item-10699"><a href="https://blogs.bootsnall.com/kelly/category/mexico-2007" title="Our long weekend in Playa del Carmen and Chichen Itza.">Mexico 2007</a> (1)
</li>
<li class="cat-item cat-item-962"><a href="https://blogs.bootsnall.com/kelly/category/new-zealand" >New Zealand</a> (17)
</li>
<li class="cat-item cat-item-23259"><a href="https://blogs.bootsnall.com/kelly/category/peru-bolivia-2010" >Peru & Bolivia 2010</a> (3)
</li>
<li class="cat-item cat-item-10695"><a href="https://blogs.bootsnall.com/kelly/category/photos-only" >PHOTOS ONLY</a> (3)
</li>
<li class="cat-item cat-item-4041"><a href="https://blogs.bootsnall.com/kelly/category/post-trip" >Post-Trip</a> (5)
</li>
<li class="cat-item cat-item-1899"><a href="https://blogs.bootsnall.com/kelly/category/pre-trip" >Pre-Trip</a> (11)
</li>
<li class="cat-item cat-item-282"><a href="https://blogs.bootsnall.com/kelly/category/singapore" >Singapore</a> (4)
</li>
<li class="cat-item cat-item-10697"><a href="https://blogs.bootsnall.com/kelly/category/spain-2005" >Spain 2005</a> (6)
</li>
<li class="cat-item cat-item-10696"><a href="https://blogs.bootsnall.com/kelly/category/tahiti-moorea" >Tahiti & Moorea</a> (2)
</li>
<li class="cat-item cat-item-961"><a href="https://blogs.bootsnall.com/kelly/category/thailand" >Thailand</a> (26)
</li>
<li class="cat-item cat-item-4913"><a href="https://blogs.bootsnall.com/kelly/category/travel-tips" >Travel Tips</a> (9)
</li>
<li class="cat-item cat-item-10698"><a href="https://blogs.bootsnall.com/kelly/category/turkey-2006" >Turkey 2006</a> (12)
</li>
<li class="cat-item cat-item-27198"><a href="https://blogs.bootsnall.com/kelly/category/usa-cross-country-south-2013" >USA Cross Country-South-2013</a> (1)
</li>

Processed HTML:
<li class="cat-item cat-item-8192"><a href="https://blogs.bootsnall.com/kelly/category/deep-thoughts" title="Reflection on traveling, books I read, reviews on what I've seen, self-discovery and all sorts of really profound things that come up while seeing the world. (This is tongue-in cheek)">'Deep Thoughts'</a> (7)
</li>
<li class="cat-item cat-item-1231"><a href="https://blogs.bootsnall.com/kelly/category/australia" >Australia</a> (25)
</li>
<li class="cat-item cat-item-2297"><a href="https://blogs.bootsnall.com/kelly/category/cook-islands" >Cook Islands</a> (7)
</li>
<li class="cat-item cat-item-10700"><a href="https://blogs.bootsnall.com/kelly/category/egypt-2007" title="Our trip to Egypt; Petra, Jordan; and Jerusalem, Israel in late 2007.">Egypt, Petra, Jerusalem 2007</a> (21)
</li>
<li class="cat-item cat-item-10699"><a href="https://blogs.bootsnall.com/kelly/category/mexico-2007" title="Our long weekend in Playa del Carmen and Chichen Itza.">Mexico 2007</a> (1)
</li>
<li class="cat-item cat-item-962"><a href="https://blogs.bootsnall.com/kelly/category/new-zealand" >New Zealand</a> (17)
</li>
<li class="cat-item cat-item-23259"><a href="https://blogs.bootsnall.com/kelly/category/peru-bolivia-2010" >Peru & Bolivia 2010</a> (3)
</li>
<li class="cat-item cat-item-10695"><a href="https://blogs.bootsnall.com/kelly/category/photos-only" >PHOTOS ONLY</a> (3)
</li>
<li class="cat-item cat-item-4041"><a href="https://blogs.bootsnall.com/kelly/category/post-trip" >Post-Trip</a> (5)
</li>
<li class="cat-item cat-item-1899"><a href="https://blogs.bootsnall.com/kelly/category/pre-trip" >Pre-Trip</a> (11)
</li>
<li class="cat-item cat-item-282"><a href="https://blogs.bootsnall.com/kelly/category/singapore" >Singapore</a> (4)
</li>
<li class="cat-item cat-item-10697"><a href="https://blogs.bootsnall.com/kelly/category/spain-2005" >Spain 2005</a> (6)
</li>
<li class="cat-item cat-item-10696"><a href="https://blogs.bootsnall.com/kelly/category/tahiti-moorea" >Tahiti & Moorea</a> (2)
</li>
<li class="cat-item cat-item-961"><a href="https://blogs.bootsnall.com/kelly/category/thailand" >Thailand</a> (26)
</li>
<li class="cat-item cat-item-4913"><a href="https://blogs.bootsnall.com/kelly/category/travel-tips" >Travel Tips</a> (9)
</li>
<li class="cat-item cat-item-10698"><a href="https://blogs.bootsnall.com/kelly/category/turkey-2006" >Turkey 2006</a> (12)
</li>
<li class="cat-item cat-item-27198"><a href="https://blogs.bootsnall.com/kelly/category/usa-cross-country-south-2013" >USA Cross Country-South-2013</a> (1)
</li>

Category pattern:
/http\:\/\/blogs\.bootsnall\.com\/kelly.*?\/category\/(?:[^\/"]+\/)*([^\/"]+)/

Items:
Array
(
    [0] => <li class="cat-item cat-item-8192"><a href="https://blogs.bootsnall.com/kelly/category/deep-thoughts" title="Reflection on traveling, books I read, reviews on what I've seen, self-discovery and all sorts of really profound things that come up while seeing the world.  (This is tongue-in cheek)">'Deep Thoughts'</a> (7) </li>
    [1] => <li class="cat-item cat-item-1231"><a href="https://blogs.bootsnall.com/kelly/category/australia" >Australia</a> (25) </li>
    [2] => <li class="cat-item cat-item-2297"><a href="https://blogs.bootsnall.com/kelly/category/cook-islands" >Cook Islands</a> (7) </li>
    [3] => <li class="cat-item cat-item-10700"><a href="https://blogs.bootsnall.com/kelly/category/egypt-2007" title="Our trip to Egypt; Petra, Jordan; and Jerusalem, Israel in late 2007.">Egypt, Petra, Jerusalem 2007</a> (21) </li>
    [4] => <li class="cat-item cat-item-10699"><a href="https://blogs.bootsnall.com/kelly/category/mexico-2007" title="Our long weekend in Playa del Carmen and Chichen Itza.">Mexico 2007</a> (1) </li>
    [5] => <li class="cat-item cat-item-962"><a href="https://blogs.bootsnall.com/kelly/category/new-zealand" >New Zealand</a> (17) </li>
    [6] => <li class="cat-item cat-item-23259"><a href="https://blogs.bootsnall.com/kelly/category/peru-bolivia-2010" >Peru & Bolivia 2010</a> (3) </li>
    [7] => <li class="cat-item cat-item-10695"><a href="https://blogs.bootsnall.com/kelly/category/photos-only" >PHOTOS ONLY</a> (3) </li>
    [8] => <li class="cat-item cat-item-4041"><a href="https://blogs.bootsnall.com/kelly/category/post-trip" >Post-Trip</a> (5) </li>
    [9] => <li class="cat-item cat-item-1899"><a href="https://blogs.bootsnall.com/kelly/category/pre-trip" >Pre-Trip</a> (11) </li>
    [10] => <li class="cat-item cat-item-282"><a href="https://blogs.bootsnall.com/kelly/category/singapore" >Singapore</a> (4) </li>
    [11] => <li class="cat-item cat-item-10697"><a href="https://blogs.bootsnall.com/kelly/category/spain-2005" >Spain 2005</a> (6) </li>
    [12] => <li class="cat-item cat-item-10696"><a href="https://blogs.bootsnall.com/kelly/category/tahiti-moorea" >Tahiti & Moorea</a> (2) </li>
    [13] => <li class="cat-item cat-item-961"><a href="https://blogs.bootsnall.com/kelly/category/thailand" >Thailand</a> (26) </li>
    [14] => <li class="cat-item cat-item-4913"><a href="https://blogs.bootsnall.com/kelly/category/travel-tips" >Travel Tips</a> (9) </li>
    [15] => <li class="cat-item cat-item-10698"><a href="https://blogs.bootsnall.com/kelly/category/turkey-2006" >Turkey 2006</a> (12) </li>
    [16] => <li class="cat-item cat-item-27198"><a href="https://blogs.bootsnall.com/kelly/category/usa-cross-country-south-2013" >USA Cross Country-South-2013</a> (1) </li>
)